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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148227526_148228550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148227526 - 148228550

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TTATCACTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCACCTGTAATA

Flanking Amino Acid:

DVYSTGHLEKHLDALLKEVK

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

71.2

40.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.7

0.69

0.9

74.5

Minor 5ss

-2.4

2.7

33.4

41.8

Minor BPS

49.4

-0

61.02

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005763

148186524 - 148246675

60152

ENSAPLT00000031068

148186524 - 148244055

57532

ENSAPLT00000013826

148186524 - 148245027

58504