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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148235227_148236481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148235227 - 148236481

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGACAT

5'SS Class:

major

3'SS Sequence:

TTTGTTTCCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

AGTACTGGAACA

Flanking Amino Acid:

IFVEEKEESKDLTKEEERKD

Intron Amino Acid Position:

863

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

71.6

40.1

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

0.68

0.8

73.8

36.8

Minor 5ss

-2.4

39.3

45.9

Minor BPS

46.4

-0.2

2.1

60.31

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031068

148186524 - 148244055

57532

ENSAPLT00000013826

148186524 - 148245027

58504

ENSAPLT00000005763

148186524 - 148246675

60152