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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148239257_148242525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148239257 - 148242525

Intron Length:

3269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TGTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTTTATGC

Flanking Amino Acid:

YKLLKPDKKIVYAYLQRYAV

Intron Amino Acid Position:

1042

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

73.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.7

81.3

36.4

Minor 5ss

41.5

-0.9

2.8

49.9

46.4

Minor BPS

52.2

0.05

1.9

65.98

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013826

148186524 - 148245027

58504

ENSAPLT00000005763

148186524 - 148246675

60152

ENSAPLT00000031068

148186524 - 148244055

57532