Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14829837_14833083_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14829837 - 14833083

Intron Length:

3247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAATAGCA

5'SS Class:

major

3'SS Sequence:

TTTTTACTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

IITATGFADGEIEDGQKQPT

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

61.9

36.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.5

0.84

0.7

86.4

26.7

Minor 5ss

31.3

-2.1

3.3

40.6

45.1

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

ABCD2

Ensembl Gene ID:

ENSAPLG00000013822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014434

14827376 - 14869131

41756