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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148489651_148489747_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

148489651 - 148489747

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATTTGGA

5'SS Class:

weak_major

3'SS Sequence:

CTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

GCATTACAAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.2

51.2

39.7

Major BPS

64.7

0.37

31.5

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

41.1

-1

3.2

58.1

46.5

Minor BPS

41.5

-0.6

50.44

40.4

Associated Gene:

Gene:

SHOX

Ensembl Gene ID:

ENSAPLG00000012938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013462

148489502 - 148520597

31096