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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148514170_148518381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148514170 - 148518381

Intron Length:

4212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

RLGLSEARVQVWFQNRRAKC

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

SHOX

Ensembl Gene ID:

ENSAPLG00000012938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013462

148489502 - 148520597

31096