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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148518618_148519491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148518618 - 148519491

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTAGC

5'SS Class:

major

3'SS Sequence:

TCCTGCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CGTGCCGTGACG

Flanking Amino Acid:

MGALRMPFQQVQAQLQLEGV

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

42.1

Major BPS

48.6

-0

1.2

40.4

Major PPT

68.5

0.42

60.6

40.3

Minor 5ss

34.8

-1.7

45.9

42.3

Minor BPS

47.3

-0.3

2.2

54.87

46.5

Associated Gene:

Gene:

SHOX

Ensembl Gene ID:

ENSAPLG00000012938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013462

148489502 - 148520597

31096