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Intron Name: Anas_platyrhynchos_platyrhynchos_1_149101950_149113504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149101950 - 149113504

Intron Length:

11555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TCTGTCTCCAAG

Flanking Amino Acid:

FHEIAPMNFQEEEMLACLGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

77.7

0.69

30.2

Major PPT

69.1

0.43

67.4

38.2

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

41.7

-0.8

2.1

47.8

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025738

149100515 - 149122527

22013