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Intron Name: Anas_platyrhynchos_platyrhynchos_1_149121266_149122212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149121266 - 149122212

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTCAGTTTAATT

Flanking Amino Acid:

GEEVVHTFTKETERSHILQS

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

68.6

0.42

1.2

71.5

43.2

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

52.3

0.15

1.8

67.54

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025738

149100515 - 149122527

22013

ENSAPLT00000029413

149113505 - 149126859

13355