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Intron Name: Anas_platyrhynchos_platyrhynchos_1_149149257_149149689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149149257 - 149149689

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AATGCTTTGATT

Flanking Amino Acid:

DKDKKDPPVIVNTNKYEFEN

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

73.5

0.53

0.9

70.3

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

62.8

0.48

1.3

73.5

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035943

149140580 - 149153521

12942