Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_149156602_149157384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149156602 - 149157384

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTG

Flanking Amino Acid:

AYFGIYDTAKGMLPDPRNTH

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.3

0.97

0.7

89.4

25.4

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

63.6

0.29

1.6

70.13

38.1

Associated Gene:

Gene:

SLC25A6

Ensembl Gene ID:

ENSAPLG00000012323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023901

149155322 - 149158877

3556

ENSAPLT00000017906

149155738 - 149217192

61455

ENSAPLT00000012833

149155747 - 149217192

61446