Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_149170843_149171959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149170843 - 149171959

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

TTTTCCTCCATT

Flanking Amino Acid:

ALGLLEKTSQGYSNTDSANT

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.1

83.9

30.3

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

68.2

0.41

72.4

31.6

Minor 5ss

46.2

-0.4

2.8

66.9

44.4

Minor BPS

65.7

0.57

88.16

37.4

Associated Gene:

Gene:

ASMTL

Ensembl Gene ID:

ENSAPLG00000009849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043280

149161478 - 149189038

27561

ENSAPLT00000028144

149166042 - 149188690

22649

ENSAPLT00000010285

149166042 - 149188690

22649