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Intron Name: Anas_platyrhynchos_platyrhynchos_1_149286663_149288507_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
149286663 - 149288507

Intron Length:
1845

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
CCCTCACTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TTCCCCTCACTC

Flanking Amino Acid:
QYNNGFLVSKVMFTACELGV

Intron Amino Acid Position:
25

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.1
1.02
0.7
87.2
27

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
70.7
0.47
0.8
61.2
34

Minor 5ss
36.1
-1.6
3
50.2
45.8

Minor BPS
50.1
-0
1.8
63.85
42.1

Associated Gene:

Gene:
ASMT

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

149286591 - 149293650
7060