Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14942296_14947546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14942296 - 14947546

Intron Length:

5251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGTGTAT

5'SS Class:

major

3'SS Sequence:

CCTCTTCTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

AGTTTATGAATA

Flanking Amino Acid:

LKKKERKKKKSVKDDNTDNE

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

64.5

37.7

Major BPS

75.5

0.63

40.9

Major PPT

70.5

0.46

0.9

65.2

36.3

Minor 5ss

31.6

-2.1

3.6

49.3

Minor BPS

52.1

0.06

1.7

64.58

35.2

Associated Gene:

Gene:

KIF21A

Ensembl Gene ID:

ENSAPLG00000014318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033948

14883243 - 14983050

99808