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Intron Name: Anas_platyrhynchos_platyrhynchos_1_149778810_149779643_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149778810 - 149779643

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TCAGTGCTAAGC

Flanking Amino Acid:

QKKKLCFKQRADEENVNMDS

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

74.8

0.62

39.8

Major PPT

80.9

0.7

0.9

72.8

42.2

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

37.7

-0.9

2.4

46.54

42.9

Associated Gene:

Gene:

CD99

Ensembl Gene ID:

ENSAPLG00000011227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011698

149777009 - 149779717

2709