Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_150007451_150010639_F

Intron Information:

Intron Rank:

134553

Intron Class:

major

Intron Phase:

Intron Coordinates:

150007451 - 150010639

Intron Length:

3189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

AATCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.4

0.68

0.9

35.7

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044512

149961379 - 150011227

49849