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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150150172_150176155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150150172 - 150176155

Intron Length:

25984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACGAGG

5'SS Class:

major

3'SS Sequence:

TTTTAAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

PMRDQIIRVKRYEKVPVILV

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

60.4

45.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.6

0.64

0.9

71.9

37.9

Minor 5ss

31.8

-2.1

3.1

39.7

45.9

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

RAP2A

Ensembl Gene ID:

ENSAPLG00000012441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012948

150149858 - 150176393

26536