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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150307515_150307990_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
150307515 - 150307990

Intron Length:
476

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACTTTAT

5'SS Class:
major

3'SS Sequence:
GCGTTTAATCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
CTTATCTTAAAA

Flanking Amino Acid:
IVAELARNLIDEDGNNQWPE

Intron Amino Acid Position:
94

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
77
34.2

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
63.9
0.31
1
55.7
43.7

Minor 5ss
40.9
-1
3.1
58.4
46.1

Minor BPS
66.5
0.51
1.5
72.98
38.7

Associated Gene:

Gene:
IPO5

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

150301289 - 150335985
34697