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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150320592_150320794_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
150320592 - 150320794

Intron Length:
203

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATAATGC

5'SS Class:
major

3'SS Sequence:
TCCTCTCTTCAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTAATGAAAT

Flanking Amino Acid:
HSTMVIKLQELIQKGTKLVL

Intron Amino Acid Position:
472

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1
61.9
37.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
72.9
0.52
1
71.1
33.6

Minor 5ss
43.7
-0.7
3
59.5
45.2

Minor BPS
53.6
0.19
2
81.24
39.2

Associated Gene:

Gene:
IPO5

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

150301289 - 150335985
34697