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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150333601_150335898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150333601 - 150335898

Intron Length:

2298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTAAA

U12 Branch Point Sequence:

GTAAACACAACT

Flanking Amino Acid:

RLANVVRQVQTSGGLWTECI

Intron Amino Acid Position:

1042

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.8

36.9

Major BPS

62.6

0.31

1.2

63.9

40.2

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

41.4

-1

58.6

45.7

Minor BPS

45.6

-0.2

65.75

43.4

Associated Gene:

Gene:

IPO5

Ensembl Gene ID:

ENSAPLG00000013789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014506

150301289 - 150335985

34697