Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_150559948_150560801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150559948 - 150560801

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTTTC

5'SS Class:

major

3'SS Sequence:

CTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GTTACTTTAACA

Flanking Amino Acid:

EACLNKDPSFRPSAKELLKH

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

73.1

Major BPS

77.3

0.68

81.5

Major PPT

92.1

0.95

0.5

92.3

18.1

Minor 5ss

41.9

-0.9

58.5

40.5

Minor BPS

77.5

0.86

1.2

81.06

Associated Gene:

Gene:

STK24

Ensembl Gene ID:

ENSAPLG00000003090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029184

150552077 - 150600300

48224

ENSAPLT00000003207

150552077 - 150588505

36429