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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150566469_150576424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

150566469 - 150576424

Intron Length:

9956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAAAACTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

57.5

0.1

1.6

59.77

41.5

Associated Gene:

Gene:

STK24

Ensembl Gene ID:

ENSAPLG00000003090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003207

150552077 - 150588505

36429