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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150616070_150617302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150616070 - 150617302

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTCACAGCAATT

Flanking Amino Acid:

VNVTVEPLHGTDYRTFETSR

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

81.5

0.71

0.8

31.7

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

43.3

-0.4

2.3

66.05

44.6

Associated Gene:

Gene:

SLC15A1

Ensembl Gene ID:

ENSAPLG00000003520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044332

150612216 - 150630385

18170

ENSAPLT00000003635

150612216 - 150630391

18176