Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_150618844_150619790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150618844 - 150619790

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

GTTGCTGTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTGTCTTAATT

Flanking Amino Acid:

PLIKKCKINFTPLRKITVGM

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.3

38.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.38

1.1

58.8

46.1

Minor 5ss

40.9

-1

2.8

48.4

41.2

Minor BPS

79.6

1.01

1.2

91.07

32.9

Associated Gene:

Gene:

SLC15A1

Ensembl Gene ID:

ENSAPLG00000003520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003635

150612216 - 150630391

18176

ENSAPLT00000044332

150612216 - 150630385

18170