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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150625995_150626161_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
150625995 - 150626161

Intron Length:
167

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGTTGC

5'SS Class:
major

3'SS Sequence:
TACTTTGTCCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TTTTTTTCATTT

Flanking Amino Acid:
DGAPDSIATHIALSMTGLIL

Intron Amino Acid Position:
128

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
71.3
35.3

Major BPS
100
1.24
0.5
100
0

Major PPT
72.3
0.5
0.9
65.3
40.8

Minor 5ss
37.5
-1.4
2.9
48.1
41.3

Minor BPS
57
0.3
1.7
79.21
37.8

Associated Gene:

Gene:
SLC15A1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

150612216 - 150630385
18170

150612216 - 150630391
18176