Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_150646924_150649343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150646924 - 150649343

Intron Length:

2420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTCCT

5'SS Class:

major

3'SS Sequence:

TTTCCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ACTTTGGTAAAT

Flanking Amino Acid:

KELSEIMHEQITPVEEKANV

Intron Amino Acid Position:

2051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

70.8

39.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

87.6

0.85

0.7

85.2

28.1

Minor 5ss

44.7

-0.6

2.8

60.1

38.2

Minor BPS

43.8

-0.3

2.6

66.56

44.4

Associated Gene:

Gene:

DOCK9

Ensembl Gene ID:

ENSAPLG00000002862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003004

150646801 - 150744575

97775

ENSAPLT00000031839

150646801 - 150772846

126046

ENSAPLT00000031834

150646801 - 150772846

126046