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Intron Name: Anas_platyrhynchos_platyrhynchos_1_150651057_150652106_R


Intron Information:

Intron Rank:
49

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
150651057 - 150652106

Intron Length:
1050

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTCATT

5'SS Class:
major

3'SS Sequence:
ATTCTGTCCGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
TTAAACTCAATT

Flanking Amino Acid:
EQCKRRTVLTAIHCFPYVKK

Intron Amino Acid Position:
1907

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1.1
74.8
41.3

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
71.4
0.48
0.8
66.3
35.1

Minor 5ss
44.3
-0.6
3.2
66.6
44.3

Minor BPS
56
0.27
1.8
75.49
40.7

Associated Gene:

Gene:
DOCK9

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

150646801 - 150744575
97775

150646801 - 150772846
126046

150646801 - 150772846
126046