Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_150673344_150675176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150673344 - 150675176

Intron Length:

1833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

ACCCATCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTGCTTCTATC

Flanking Amino Acid:

FQYMGKRYIARNQEGLGSIV

Intron Amino Acid Position:

1352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

72.7

0.51

0.9

65.2

35.2

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

-0.1

1.9

66.2

40.1

Associated Gene:

Gene:

DOCK9

Ensembl Gene ID:

ENSAPLG00000002862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031834

150646801 - 150772846

126046

ENSAPLT00000003004

150646801 - 150744575

97775