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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15081273_15093720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15081273 - 15093720

Intron Length:

12448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

QAIGNKEWREFGRTEVIDNT

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955

ENSAPLT00000041949

15061987 - 15097564

35578