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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15093825_15096642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15093825 - 15096642

Intron Length:

2818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

FEERENLRFDFYDVDSKSPN

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

30.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

42.1

-0.9

2.8

43.6

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955

ENSAPLT00000041949

15061987 - 15097564

35578