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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15096683_15099400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15096683 - 15099400

Intron Length:

2718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCTTTTGTTATT

Flanking Amino Acid:

DSKSPNLSKHDFLGQMFCTL

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.5

0.78

0.8

81.3

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

47.1

-0.1

2.2

70.14

41.8

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955