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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15099478_15122155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15099478 - 15122155

Intron Length:

22678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TATTTTCTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ATTTTCTTATAG

Flanking Amino Acid:

SQGSRLEKPIVGIPGKKCGT

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

85.7

0.8

0.7

81.1

30.6

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

59.1

0.15

1.8

66.72

40.9

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955