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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15126802_15131826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15126802 - 15131826

Intron Length:

5025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TACATTTGAATA

Flanking Amino Acid:

VRALCNGDYDRTIKVEVYDW

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.1

43.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

92.1

0.95

0.5

92.3

18.1

Minor 5ss

46.1

-0.4

2.9

65.4

45.8

Minor BPS

49.9

-0

1.4

57.34

36.3

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594