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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15126802_15137939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15126802 - 15137939

Intron Length:

11138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCAATATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATA

Flanking Amino Acid:

VRALCNGDYDRHDFIGEFTT

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.1

43.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.65

0.9

74.9

33.8

Minor 5ss

46.1

-0.4

2.9

65.4

45.8

Minor BPS

68.8

0.59

1.4

78.75

31.7

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016684

15061987 - 15173941

111955