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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151284725_151291365_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151284725 - 151291365

Intron Length:

6641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CCTGCTTTTACA

Flanking Amino Acid:

TIPGFDGVVKDADEAVRIAR

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

81.6

0.71

0.8

75.1

33.3

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

53.8

0.11

1.8

62.29

44.3

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002680

151217052 - 151485708

268657

ENSAPLT00000047183

151217052 - 151485143

268092

ENSAPLT00000002674

151208893 - 151485708

276816

ENSAPLT00000030060

151217052 - 151484567

267516

ENSAPLT00000029533

151217052 - 151473953

256902

ENSAPLT00000022973

151217052 - 151472829

255778