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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151291403_151296799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151291403 - 151296799

Intron Length:

5397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TTCTGTCTAATT

Flanking Amino Acid:

DEAVRIAREIGYPVMIKASA

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

62.3

0.28

0.9

61.3

35.1

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

52.3

0.15

2.1

75.83

41.7

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022973

151217052 - 151472829

255778

ENSAPLT00000002680

151217052 - 151485708

268657

ENSAPLT00000047183

151217052 - 151485143

268092

ENSAPLT00000002674

151208893 - 151485708

276816

ENSAPLT00000030060

151217052 - 151484567

267516

ENSAPLT00000029533

151217052 - 151473953

256902