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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151304928_151310826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151304928 - 151310826

Intron Length:

5899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTACT

5'SS Class:

major

3'SS Sequence:

GTCATTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TGTTAGTTAATA

Flanking Amino Acid:

IDNPRHIEIQVLADKHGNAL

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

78.3

35.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

76.1

0.59

72.6

42.2

Minor 5ss

40.8

-1

2.4

53.1

43.6

Minor BPS

56.3

0.2

2.2

73.11

38.8

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002674

151208893 - 151485708

276816

ENSAPLT00000030060

151217052 - 151484567

267516

ENSAPLT00000029533

151217052 - 151473953

256902

ENSAPLT00000022973

151217052 - 151472829

255778

ENSAPLT00000002680

151217052 - 151485708

268657

ENSAPLT00000047183

151217052 - 151485143

268092