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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151377971_151416572_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

151377971 - 151416572

Intron Length:

38602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

GGTGTCACAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTGTCTTCATA

Flanking Amino Acid:

AVSKDGSSFSVEVDGMKLNV

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

59.7

0.22

1.1

52.3

41.6

Minor 5ss

45.8

-0.4

2.8

69.7

40.4

Minor BPS

53.5

0.1

1.8

65.77

41.9

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002674

151208893 - 151485708

276816

ENSAPLT00000030060

151217052 - 151484567

267516

ENSAPLT00000029533

151217052 - 151473953

256902

ENSAPLT00000022973

151217052 - 151472829

255778

ENSAPLT00000002680

151217052 - 151485708

268657

ENSAPLT00000047183

151217052 - 151485143

268092