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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151429646_151471321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151429646 - 151471321

Intron Length:

41676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TCCTATTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TATGCTAAAACA

Flanking Amino Acid:

STSIQFLGTVYKLQILTKVA

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

78.8

0.65

0.8

77.1

31.3

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

48.5

-0.1

65.06

41.5

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002674

151208893 - 151485708

276816

ENSAPLT00000030060

151217052 - 151484567

267516

ENSAPLT00000029533

151217052 - 151473953

256902

ENSAPLT00000022973

151217052 - 151472829

255778

ENSAPLT00000002680

151217052 - 151485708

268657

ENSAPLT00000047183

151217052 - 151485143

268092