Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_15145755_15149152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15145755 - 15149152

Intron Length:

3398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TATTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCTCTTTTATTT

Flanking Amino Acid:

KKKKYINSGTVTLLSFLIET

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

81.2

32.7

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

84.6

0.78

0.8

81.5

35.8

Minor 5ss

41.5

-0.9

2.8

41.2

Minor BPS

56.7

0.29

1.6

72.13

39.8

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955