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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151471463_151472808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151471463 - 151472808

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GATTTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATGGAGT

Flanking Amino Acid:

VAVSVKPGDMAARVTD*

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

75.1

0.57

68.9

41.7

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

49.5

0.05

2.1

75.67

40.7

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022973

151217052 - 151472829

255778