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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151471463_151473694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151471463 - 151473694

Intron Length:

2232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATCAA

U12 Branch Point Sequence:

TTTTCCCCACTC

Flanking Amino Acid:

VAVSVKPGDMVLEAAWFVAT

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

55.1

0.13

1.2

57.8

Major PPT

76.1

0.59

0.8

74.2

29.7

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

49.5

-0

2.1

71.38

40.1

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029533

151217052 - 151473953

256902