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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151483631_151485627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151483631 - 151485627

Intron Length:

1997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

GAATTTACCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCT

Flanking Amino Acid:

NSMIAAKTGKLQVVGSE*

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.4

0.35

55.8

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

67.8

0.64

1.5

82.83

39.1

Associated Gene:

Gene:

PCCA

Ensembl Gene ID:

ENSAPLG00000002609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002674

151208893 - 151485708

276816

ENSAPLT00000002680

151217052 - 151485708

268657