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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151541784_151544953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151541784 - 151544953

Intron Length:

3170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTGAAT

Flanking Amino Acid:

KLIRKDKLLENAGLLRKGLL

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.6

0.71

0.7

77.5

24.5

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

63.4

0.5

1.7

85.21

34.5

Associated Gene:

Gene:

TMTC4

Ensembl Gene ID:

ENSAPLG00000002783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044962

151523971 - 151564681

40711

ENSAPLT00000002838

151523458 - 151564681

41224