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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15155780_15156542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15155780 - 15156542

Intron Length:

763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CTTGCTTCAACA

Flanking Amino Acid:

TVAIDFTASNGNPSQPTSLH

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

82.6

29.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

74.3

0.55

0.9

69.6

35.5

Minor 5ss

37.2

-1.4

46.4

Minor BPS

61.1

0.34

1.7

71.01

41.7

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955