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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15156725_15158658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15156725 - 15158658

Intron Length:

1934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TGTCTCTTACTT

Flanking Amino Acid:

DGRVSHEFALNGNPQNPYCH

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

72.9

34.4

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

74.3

0.55

0.9

75.1

34.3

Minor 5ss

43.3

-0.7

2.9

52.2

Minor BPS

0.45

1.6

77.64

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016684

15061987 - 15173941

111955

ENSAPLT00000036076

15061987 - 15175580

113594