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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15158787_15162392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15158787 - 15162392

Intron Length:

3606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TTTACTATCATA

Flanking Amino Acid:

NFAPVINHVARYASSVKDGS

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

48.8

-0.1

68.67

38.1

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955