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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15162496_15165906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15162496 - 15165906

Intron Length:

3411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ATGTATTAAACC

Flanking Amino Acid:

MAQTKESIVNASKLPMSIII

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

80.5

0.69

82.5

26.5

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

53.1

0.08

1.8

65.31

40.5

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955