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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15168850_15173752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15168850 - 15173752

Intron Length:

4903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGAG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAC

U12 Branch Point Sequence:

CTTGTGTGAACG

Flanking Amino Acid:

GKFAERDIVQFVPFRDYIDR

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

62.1

38.7

Major BPS

0.42

1.1

57.7

Major PPT

88.5

0.87

0.7

84.9

29.9

Minor 5ss

22.9

-3.1

3.3

27.9

44.1

Minor BPS

45.3

-0.4

2.3

55.07

46.3

Associated Gene:

Gene:

CPNE8

Ensembl Gene ID:

ENSAPLG00000015941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036076

15061987 - 15175580

113594

ENSAPLT00000016684

15061987 - 15173941

111955