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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151779498_151779647_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
151779498 - 151779647

Intron Length:
150

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTCAAA

5'SS Class:
major

3'SS Sequence:
TGTATTTTAAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATTAT

U12 Branch Point Sequence:
TGTATTTTAAAA

Flanking Amino Acid:
QEKKEQAEMKRKVQEEELRE

Intron Amino Acid Position:
819

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.7
0.54
1.1
68.7
37.6

Major BPS
76.9
0.67
1
66.3
40.4

Major PPT
66.1
0.36
1.2
68.1
41.4

Minor 5ss
44.9
-0.6
2.6
57.3
47

Minor BPS
62.3
0.38
1.4
69.78
36

Associated Gene:

Gene:
NALCN

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

151748952 - 151967465
218514

151748952 - 151967465
218514

151748952 - 151967465
218514